Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRBC1P01850 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRBC1P01850 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBC1P01850 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBC1P01850 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBC1P01850 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBC1P01850 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.03■□□□□ 0.48
TRBC1P01850 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBC1P01850 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.03■□□□□ 0.48
TRBC1P01850 AC092119.3-201ENST00000612618 583 ntBASIC18.03■□□□□ 0.48
TRBC1P01850 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
TRBC1P01850 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBC1P01850 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBC1P01850 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBC1P01850 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBC1P01850 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBC1P01850 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBC1P01850 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRBC1P01850 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRBC1P01850 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRBC1P01850 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRBC1P01850 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBC1P01850 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBC1P01850 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRBC1P01850 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.02■□□□□ 0.48
TRBC1P01850 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.02■□□□□ 0.48
TRBC1P01850 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.02■□□□□ 0.48
TRBC1P01850 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBC1P01850 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBC1P01850 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBC1P01850 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBC1P01850 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBC1P01850 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
TRBC1P01850 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBC1P01850 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBC1P01850 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
TRBC1P01850 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBC1P01850 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBC1P01850 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBC1P01850 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.01■□□□□ 0.47
TRBC1P01850 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 AC246785.2-201ENST00000432512 513 ntBASIC18.01■□□□□ 0.47
TRBC1P01850 TOB2P1-201ENST00000469761 992 ntBASIC18.01■□□□□ 0.47
TRBC1P01850 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBC1P01850 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.01■□□□□ 0.47
TRBC1P01850 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 AC011840.4-201ENST00000578471 627 ntBASIC18.01■□□□□ 0.47
TRBC1P01850 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBC1P01850 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 AC092329.2-201ENST00000598402 547 ntBASIC18.01■□□□□ 0.47
TRBC1P01850 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBC1P01850 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBC1P01850 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRBC1P01850 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBC1P01850 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBC1P01850 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBC1P01850 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms