Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.03■□□□□ 0.32
CLPTM1O96005 LINC01126-201ENST00000623515 1646 ntBASIC17.03■□□□□ 0.32
CLPTM1O96005 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CLPTM1O96005 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CLPTM1O96005 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.03■□□□□ 0.32
CLPTM1O96005 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.03■□□□□ 0.32
CLPTM1O96005 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CLPTM1O96005 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.03■□□□□ 0.32
CLPTM1O96005 C1QBPP2-201ENST00000528754 825 ntBASIC17.03■□□□□ 0.32
CLPTM1O96005 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 RN7SL471P-201ENST00000580476 299 ntBASIC17.03■□□□□ 0.32
CLPTM1O96005 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLPTM1O96005 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLPTM1O96005 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLPTM1O96005 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPTM1O96005 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CLPTM1O96005 PCDHA14-201ENST00000506751 2298 ntBASIC17.03■□□□□ 0.32
CLPTM1O96005 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.02■□□□□ 0.32
CLPTM1O96005 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLPTM1O96005 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.02■□□□□ 0.32
CLPTM1O96005 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.02■□□□□ 0.32
CLPTM1O96005 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.02■□□□□ 0.32
CLPTM1O96005 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLPTM1O96005 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.02■□□□□ 0.32
CLPTM1O96005 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CLPTM1O96005 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.32
CLPTM1O96005 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 AL158047.1-201ENST00000445918 881 ntBASIC17.02■□□□□ 0.32
CLPTM1O96005 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.02■□□□□ 0.32
CLPTM1O96005 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.02■□□□□ 0.32
CLPTM1O96005 AC142381.4-202ENST00000563973 229 ntBASIC17.02■□□□□ 0.32
CLPTM1O96005 MTDHP1-201ENST00000605323 784 ntBASIC17.02■□□□□ 0.32
CLPTM1O96005 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
CLPTM1O96005 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.02■□□□□ 0.32
CLPTM1O96005 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPTM1O96005 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.02■□□□□ 0.32
CLPTM1O96005 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.02■□□□□ 0.32
CLPTM1O96005 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.02■□□□□ 0.31
CLPTM1O96005 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLPTM1O96005 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLPTM1O96005 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.02■□□□□ 0.31
CLPTM1O96005 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLPTM1O96005 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.02■□□□□ 0.31
CLPTM1O96005 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLPTM1O96005 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLPTM1O96005 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.01■□□□□ 0.31
CLPTM1O96005 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.01■□□□□ 0.31
CLPTM1O96005 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.01■□□□□ 0.31
CLPTM1O96005 AL023875.1-201ENST00000640777 796 ntBASIC17.01■□□□□ 0.31
CLPTM1O96005 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPTM1O96005 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPTM1O96005 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms