Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FDX1P1-201ENST00000449115 551 ntBASIC17.67■□□□□ 0.42
CPNE6O95741 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE6O95741 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE6O95741 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE6O95741 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CPNE6O95741 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CPNE6O95741 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE6O95741 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE6O95741 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CPNE6O95741 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPNE6O95741 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CPNE6O95741 KRT8P10-201ENST00000450021 1447 ntBASIC17.66■□□□□ 0.42
CPNE6O95741 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CPNE6O95741 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE6O95741 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CPNE6O95741 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE6O95741 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CPNE6O95741 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.66■□□□□ 0.42
CPNE6O95741 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 EMBP1-201ENST00000458200 901 ntBASIC17.66■□□□□ 0.42
CPNE6O95741 RN7SL606P-201ENST00000472779 293 ntBASIC17.66■□□□□ 0.42
CPNE6O95741 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE6O95741 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CPNE6O95741 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE6O95741 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE6O95741 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE6O95741 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE6O95741 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE6O95741 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE6O95741 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE6O95741 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE6O95741 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPNE6O95741 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.65■□□□□ 0.42
CPNE6O95741 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE6O95741 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.65■□□□□ 0.42
CPNE6O95741 AC099336.1-202ENST00000602961 463 ntBASIC17.65■□□□□ 0.42
CPNE6O95741 AC138894.3-201ENST00000603787 634 ntBASIC17.65■□□□□ 0.42
CPNE6O95741 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.65■□□□□ 0.42
CPNE6O95741 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 AC083906.6-201ENST00000641366 219 ntBASIC17.65■□□□□ 0.42
CPNE6O95741 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE6O95741 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE6O95741 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE6O95741 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE6O95741 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE6O95741 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE6O95741 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPNE6O95741 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.64■□□□□ 0.42
CPNE6O95741 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE6O95741 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CPNE6O95741 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE6O95741 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms