Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.1■□□□□ 0.01
SIX6O95475 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SIX6O95475 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.1■□□□□ 0.01
SIX6O95475 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX6O95475 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.1■□□□□ 0.01
SIX6O95475 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SIX6O95475 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SIX6O95475 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.1■□□□□ 0.01
SIX6O95475 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SIX6O95475 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SIX6O95475 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
SIX6O95475 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.09■□□□□ 0.01
SIX6O95475 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SIX6O95475 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SIX6O95475 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 KRT8P41-201ENST00000533985 1514 ntBASIC15.09■□□□□ 0.01
SIX6O95475 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SIX6O95475 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.09■□□□□ 0.01
SIX6O95475 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SIX6O95475 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.09■□□□□ 0.01
SIX6O95475 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.09■□□□□ 0.01
SIX6O95475 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SIX6O95475 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.09■□□□□ 0.01
SIX6O95475 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 HTR7P1-201ENST00000538670 1336 ntBASIC15.09■□□□□ 0.01
SIX6O95475 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.09■□□□□ 0.01
SIX6O95475 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SIX6O95475 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SIX6O95475 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.08■□□□□ 0.01
SIX6O95475 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.08■□□□□ 0.01
SIX6O95475 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SIX6O95475 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SIX6O95475 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.08■□□□□ 0.01
SIX6O95475 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SIX6O95475 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.08■□□□□ 0
SIX6O95475 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.08■□□□□ 0
SIX6O95475 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.08■□□□□ 0
SIX6O95475 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.08■□□□□ 0
SIX6O95475 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.08■□□□□ 0
SIX6O95475 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.08■□□□□ 0
SIX6O95475 RAP2CP1-201ENST00000605103 478 ntBASIC15.08■□□□□ 0
SIX6O95475 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.08■□□□□ 0
SIX6O95475 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.08■□□□□ 0
SIX6O95475 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
SIX6O95475 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.08■□□□□ 0
SIX6O95475 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.08■□□□□ 0
SIX6O95475 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.08■□□□□ 0
SIX6O95475 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SIX6O95475 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms