Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.94■□□□□ 0.62
RTN3O95197 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.94■□□□□ 0.62
RTN3O95197 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RTN3O95197 TSPY19P-201ENST00000418461 509 ntBASIC18.94■□□□□ 0.62
RTN3O95197 TSPY18P-201ENST00000441642 509 ntBASIC18.94■□□□□ 0.62
RTN3O95197 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.94■□□□□ 0.62
RTN3O95197 AC091607.1-201ENST00000490318 1060 ntBASIC18.94■□□□□ 0.62
RTN3O95197 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.94■□□□□ 0.62
RTN3O95197 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.94■□□□□ 0.62
RTN3O95197 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.94■□□□□ 0.62
RTN3O95197 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RTN3O95197 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RTN3O95197 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.94■□□□□ 0.62
RTN3O95197 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTN3O95197 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN3O95197 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RTN3O95197 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RTN3O95197 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN3O95197 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RTN3O95197 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RTN3O95197 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.93■□□□□ 0.62
RTN3O95197 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 TPM4P1-201ENST00000436100 807 ntBASIC18.93■□□□□ 0.62
RTN3O95197 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RTN3O95197 AC091304.2-201ENST00000564639 760 ntBASIC18.93■□□□□ 0.62
RTN3O95197 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.93■□□□□ 0.62
RTN3O95197 LINC01711-201ENST00000598340 967 ntBASIC18.93■□□□□ 0.62
RTN3O95197 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN3O95197 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RTN3O95197 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN3O95197 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RTN3O95197 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN3O95197 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.93■□□□□ 0.62
RTN3O95197 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTN3O95197 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.93■□□□□ 0.62
RTN3O95197 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.92■□□□□ 0.62
RTN3O95197 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RTN3O95197 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RTN3O95197 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RTN3O95197 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.92■□□□□ 0.62
RTN3O95197 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.92■□□□□ 0.62
RTN3O95197 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.92■□□□□ 0.62
RTN3O95197 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.92■□□□□ 0.62
RTN3O95197 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.92■□□□□ 0.62
RTN3O95197 AC138894.3-201ENST00000603787 634 ntBASIC18.92■□□□□ 0.62
RTN3O95197 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.92■□□□□ 0.62
RTN3O95197 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RTN3O95197 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.92■□□□□ 0.62
RTN3O95197 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 AC093010.1-201ENST00000473625 1624 ntBASIC18.92■□□□□ 0.62
RTN3O95197 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTN3O95197 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RTN3O95197 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
RTN3O95197 PHGDH-209ENST00000641074 1780 ntBASIC18.91■□□□□ 0.62
RTN3O95197 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.91■□□□□ 0.62
RTN3O95197 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms