Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ZNF253O75346 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF253O75346 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.06□□□□□ -0.16
ZNF253O75346 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF253O75346 RPS2P4-201ENST00000476944 856 ntBASIC14.06□□□□□ -0.16
ZNF253O75346 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ZNF253O75346 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF253O75346 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.06□□□□□ -0.16
ZNF253O75346 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF253O75346 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.06□□□□□ -0.16
ZNF253O75346 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ZNF253O75346 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.06□□□□□ -0.16
ZNF253O75346 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ZNF253O75346 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
ZNF253O75346 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ZNF253O75346 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ZNF253O75346 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ZNF253O75346 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ZNF253O75346 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.06□□□□□ -0.16
ZNF253O75346 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF253O75346 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF253O75346 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ZNF253O75346 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ZNF253O75346 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF253O75346 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ZNF253O75346 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF253O75346 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.05□□□□□ -0.16
ZNF253O75346 AC090192.1-201ENST00000517740 490 ntBASIC14.05□□□□□ -0.16
ZNF253O75346 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.05□□□□□ -0.16
ZNF253O75346 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ZNF253O75346 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.05□□□□□ -0.16
ZNF253O75346 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 AC130371.2-201ENST00000619443 611 ntBASIC14.05□□□□□ -0.16
ZNF253O75346 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 AL118508.1-201ENST00000613502 2345 ntBASIC14.05□□□□□ -0.16
ZNF253O75346 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.05□□□□□ -0.16
ZNF253O75346 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.05□□□□□ -0.16
ZNF253O75346 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.05□□□□□ -0.16
ZNF253O75346 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ZNF253O75346 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF253O75346 MST1L-201ENST00000442552 2185 ntBASIC14.05□□□□□ -0.16
ZNF253O75346 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF253O75346 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF253O75346 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ZNF253O75346 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF253O75346 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ZNF253O75346 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF253O75346 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF253O75346 ESRRAP1-201ENST00000400596 1257 ntBASIC14.04□□□□□ -0.16
ZNF253O75346 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF253O75346 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.04□□□□□ -0.16
ZNF253O75346 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZNF253O75346 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms