Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HCN1O60741 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.86■□□□□ 0.29
HCN1O60741 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.86■□□□□ 0.29
HCN1O60741 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HCN1O60741 AC139713.2-201ENST00000641328 2723 ntBASIC16.85■□□□□ 0.29
HCN1O60741 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.85■□□□□ 0.29
HCN1O60741 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
HCN1O60741 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
HCN1O60741 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 HBZP1-201ENST00000354915 429 ntBASIC16.85■□□□□ 0.29
HCN1O60741 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.85■□□□□ 0.29
HCN1O60741 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
HCN1O60741 MIR564-202ENST00000385049 94 ntBASIC16.85■□□□□ 0.29
HCN1O60741 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.85■□□□□ 0.29
HCN1O60741 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.85■□□□□ 0.29
HCN1O60741 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
HCN1O60741 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.85■□□□□ 0.29
HCN1O60741 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.85■□□□□ 0.29
HCN1O60741 HOXB1-202ENST00000577092 1414 ntBASIC16.85■□□□□ 0.29
HCN1O60741 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HCN1O60741 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.84■□□□□ 0.29
HCN1O60741 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HCN1O60741 AC008556.1-201ENST00000610908 2040 ntBASIC16.84■□□□□ 0.29
HCN1O60741 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.84■□□□□ 0.29
HCN1O60741 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.84■□□□□ 0.29
HCN1O60741 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.84■□□□□ 0.29
HCN1O60741 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.84■□□□□ 0.29
HCN1O60741 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HCN1O60741 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
HCN1O60741 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.84■□□□□ 0.29
HCN1O60741 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HCN1O60741 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.84■□□□□ 0.29
HCN1O60741 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
HCN1O60741 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HCN1O60741 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.84■□□□□ 0.29
HCN1O60741 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HCN1O60741 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
HCN1O60741 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.83■□□□□ 0.28
HCN1O60741 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.83■□□□□ 0.28
HCN1O60741 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.83■□□□□ 0.28
HCN1O60741 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.83■□□□□ 0.28
HCN1O60741 KRT18P23-201ENST00000435622 1283 ntBASIC16.83■□□□□ 0.28
HCN1O60741 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.83■□□□□ 0.28
HCN1O60741 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.83■□□□□ 0.28
HCN1O60741 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.83■□□□□ 0.28
HCN1O60741 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
HCN1O60741 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.83■□□□□ 0.28
HCN1O60741 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.83■□□□□ 0.28
HCN1O60741 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.83■□□□□ 0.28
HCN1O60741 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.83■□□□□ 0.28
HCN1O60741 MIR3917-201ENST00000580971 93 ntBASIC16.83■□□□□ 0.28
HCN1O60741 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
HCN1O60741 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.83■□□□□ 0.28
HCN1O60741 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HCN1O60741 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HCN1O60741 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HCN1O60741 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HCN1O60741 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HCN1O60741 MYLKP1-201ENST00000509077 1580 ntBASIC16.82■□□□□ 0.28
HCN1O60741 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HCN1O60741 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HCN1O60741 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms