Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 AC106820.2-201ENST00000563775 3264 ntBASIC16.99■□□□□ 0.31
PLOD3O60568 KRT89P-201ENST00000620027 1478 ntBASIC16.99■□□□□ 0.31
PLOD3O60568 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PLOD3O60568 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.98■□□□□ 0.31
PLOD3O60568 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.98■□□□□ 0.31
PLOD3O60568 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.98■□□□□ 0.31
PLOD3O60568 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PLOD3O60568 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
PLOD3O60568 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.98■□□□□ 0.31
PLOD3O60568 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.98■□□□□ 0.31
PLOD3O60568 FLJ13224-201ENST00000313737 1514 ntBASIC16.98■□□□□ 0.31
PLOD3O60568 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.98■□□□□ 0.31
PLOD3O60568 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.98■□□□□ 0.31
PLOD3O60568 RN7SL850P-201ENST00000579959 291 ntBASIC16.98■□□□□ 0.31
PLOD3O60568 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
PLOD3O60568 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PLOD3O60568 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.98■□□□□ 0.31
PLOD3O60568 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.98■□□□□ 0.31
PLOD3O60568 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 AC138028.4-201ENST00000564984 1845 ntBASIC16.98■□□□□ 0.31
PLOD3O60568 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PLOD3O60568 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PLOD3O60568 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 NOC2LP2-201ENST00000407594 1944 ntBASIC16.98■□□□□ 0.31
PLOD3O60568 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PLOD3O60568 AC012313.1-201ENST00000593393 3059 ntBASIC16.98■□□□□ 0.31
PLOD3O60568 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PLOD3O60568 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.97■□□□□ 0.31
PLOD3O60568 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PLOD3O60568 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.97■□□□□ 0.31
PLOD3O60568 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 AC063952.2-201ENST00000498792 1227 ntBASIC16.97■□□□□ 0.31
PLOD3O60568 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 AC113404.2-201ENST00000507884 177 ntBASIC16.97■□□□□ 0.31
PLOD3O60568 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.97■□□□□ 0.31
PLOD3O60568 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.97■□□□□ 0.31
PLOD3O60568 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.97■□□□□ 0.31
PLOD3O60568 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.97■□□□□ 0.31
PLOD3O60568 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.97■□□□□ 0.31
PLOD3O60568 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.97■□□□□ 0.31
PLOD3O60568 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.97■□□□□ 0.31
PLOD3O60568 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PLOD3O60568 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PLOD3O60568 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PLOD3O60568 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PLOD3O60568 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PLOD3O60568 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PLOD3O60568 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.96■□□□□ 0.31
PLOD3O60568 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PLOD3O60568 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PLOD3O60568 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PLOD3O60568 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PLOD3O60568 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.96■□□□□ 0.31
PLOD3O60568 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PLOD3O60568 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.96■□□□□ 0.31
PLOD3O60568 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PLOD3O60568 FAM8A6P-201ENST00000407496 1135 ntBASIC16.96■□□□□ 0.31
PLOD3O60568 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PLOD3O60568 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.96■□□□□ 0.31
PLOD3O60568 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PLOD3O60568 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.96■□□□□ 0.31
PLOD3O60568 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.96■□□□□ 0.31
PLOD3O60568 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms