Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2A1O14983 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 AL139288.1-201ENST00000623748 933 ntBASIC20.56■□□□□ 0.88
ATP2A1O14983 AC117500.6-201ENST00000624871 588 ntBASIC20.56■□□□□ 0.88
ATP2A1O14983 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 AL356309.3-201ENST00000624132 1934 ntBASIC20.56■□□□□ 0.88
ATP2A1O14983 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2A1O14983 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP2A1O14983 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
ATP2A1O14983 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ATP2A1O14983 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP2A1O14983 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ATP2A1O14983 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATP2A1O14983 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP2A1O14983 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP2A1O14983 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.55■□□□□ 0.88
ATP2A1O14983 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.55■□□□□ 0.88
ATP2A1O14983 AC106730.1-201ENST00000566722 1090 ntBASIC20.55■□□□□ 0.88
ATP2A1O14983 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.55■□□□□ 0.88
ATP2A1O14983 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.55■□□□□ 0.88
ATP2A1O14983 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.55■□□□□ 0.88
ATP2A1O14983 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.55■□□□□ 0.88
ATP2A1O14983 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ATP2A1O14983 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP2A1O14983 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.54■□□□□ 0.88
ATP2A1O14983 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP2A1O14983 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ATP2A1O14983 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ATP2A1O14983 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ATP2A1O14983 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.54■□□□□ 0.88
ATP2A1O14983 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
ATP2A1O14983 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 PHGDH-209ENST00000641074 1780 ntBASIC20.54■□□□□ 0.88
ATP2A1O14983 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP2A1O14983 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A1O14983 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A1O14983 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A1O14983 AC087289.5-201ENST00000586076 3175 ntBASIC20.53■□□□□ 0.88
ATP2A1O14983 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A1O14983 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A1O14983 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A1O14983 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A1O14983 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A1O14983 AC122714.2-201ENST00000502787 707 ntBASIC20.53■□□□□ 0.88
ATP2A1O14983 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP2A1O14983 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A1O14983 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP2A1O14983 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP2A1O14983 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP2A1O14983 AC006538.3-201ENST00000612495 578 ntBASIC20.53■□□□□ 0.88
ATP2A1O14983 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
ATP2A1O14983 AC116407.3-201ENST00000623905 1129 ntBASIC20.53■□□□□ 0.88
ATP2A1O14983 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP2A1O14983 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A1O14983 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A1O14983 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP2A1O14983 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATP2A1O14983 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
ATP2A1O14983 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP2A1O14983 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A1O14983 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A1O14983 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2A1O14983 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A1O14983 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP2A1O14983 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
ATP2A1O14983 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A1O14983 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A1O14983 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP2A1O14983 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP2A1O14983 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.52■□□□□ 0.88
ATP2A1O14983 AC025062.2-201ENST00000605477 670 ntBASIC20.52■□□□□ 0.88
ATP2A1O14983 AC018445.3-201ENST00000624177 1945 ntBASIC20.52■□□□□ 0.88
ATP2A1O14983 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP2A1O14983 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms