Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TSSC2-201ENST00000450217 709 ntBASIC17.21■□□□□ 0.35
PCDH17O14917 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH17O14917 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH17O14917 AC024563.2-201ENST00000603282 481 ntBASIC17.21■□□□□ 0.35
PCDH17O14917 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.21■□□□□ 0.35
PCDH17O14917 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH17O14917 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDH17O14917 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH17O14917 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH17O14917 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDH17O14917 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDH17O14917 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH17O14917 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.21■□□□□ 0.34
PCDH17O14917 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.21■□□□□ 0.34
PCDH17O14917 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
PCDH17O14917 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH17O14917 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH17O14917 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH17O14917 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH17O14917 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH17O14917 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PCDH17O14917 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 AL450487.1-201ENST00000426799 995 ntBASIC17.2■□□□□ 0.34
PCDH17O14917 TPM4P1-201ENST00000436100 807 ntBASIC17.2■□□□□ 0.34
PCDH17O14917 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDH17O14917 AP003733.1-201ENST00000491725 852 ntBASIC17.2■□□□□ 0.34
PCDH17O14917 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH17O14917 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH17O14917 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH17O14917 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDH17O14917 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH17O14917 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDH17O14917 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PCDH17O14917 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
PCDH17O14917 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH17O14917 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDH17O14917 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDH17O14917 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PCDH17O14917 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDH17O14917 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH17O14917 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PCDH17O14917 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDH17O14917 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDH17O14917 CHCHD2P8-201ENST00000429873 447 ntBASIC17.19■□□□□ 0.34
PCDH17O14917 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDH17O14917 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDH17O14917 AC090616.6-201ENST00000582640 721 ntBASIC17.19■□□□□ 0.34
PCDH17O14917 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDH17O14917 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDH17O14917 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDH17O14917 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH17O14917 ESPNP-201ENST00000270691 2015 ntBASIC17.18■□□□□ 0.34
PCDH17O14917 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH17O14917 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDH17O14917 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH17O14917 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDH17O14917 TSPY22P-201ENST00000427496 604 ntBASIC17.18■□□□□ 0.34
PCDH17O14917 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH17O14917 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH17O14917 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDH17O14917 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
PCDH17O14917 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 CLEC4GP1-201ENST00000596555 870 ntBASIC17.18■□□□□ 0.34
PCDH17O14917 GPR32P1-201ENST00000601788 811 ntBASIC17.18■□□□□ 0.34
PCDH17O14917 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms