Protein–RNA interactions for Protein: O00463

TRAF5, TNF receptor-associated factor 5, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5O00463 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
TRAF5O00463 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAF5O00463 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAF5O00463 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.42■■□□□ 1.02
TRAF5O00463 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.42■■□□□ 1.02
TRAF5O00463 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.42■■□□□ 1.02
TRAF5O00463 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAF5O00463 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRAF5O00463 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TRAF5O00463 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.41■■□□□ 1.02
TRAF5O00463 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TRAF5O00463 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TRAF5O00463 AC120498.9-201ENST00000339021 3867 ntBASIC21.41■■□□□ 1.02
TRAF5O00463 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.41■■□□□ 1.02
TRAF5O00463 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.41■■□□□ 1.02
TRAF5O00463 AL078644.1-201ENST00000609881 752 ntBASIC21.41■■□□□ 1.02
TRAF5O00463 MIR1199-201ENST00000621445 119 ntBASIC21.41■■□□□ 1.02
TRAF5O00463 AC005593.1-201ENST00000624894 515 ntBASIC21.41■■□□□ 1.02
TRAF5O00463 AP000867.4-201ENST00000641616 219 ntBASIC21.41■■□□□ 1.02
TRAF5O00463 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TRAF5O00463 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TRAF5O00463 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TRAF5O00463 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAF5O00463 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TRAF5O00463 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 MIR149-201ENST00000384879 89 ntBASIC21.4■■□□□ 1.02
TRAF5O00463 AC073621.1-201ENST00000392730 636 ntBASIC21.4■■□□□ 1.02
TRAF5O00463 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
TRAF5O00463 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAF5O00463 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TRAF5O00463 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TRAF5O00463 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.4■■□□□ 1.02
TRAF5O00463 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.4■■□□□ 1.02
TRAF5O00463 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.4■■□□□ 1.02
TRAF5O00463 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.4■■□□□ 1.02
TRAF5O00463 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAF5O00463 FP475955.4-201ENST00000623131 1990 ntBASIC21.39■■□□□ 1.02
TRAF5O00463 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.39■■□□□ 1.02
TRAF5O00463 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRAF5O00463 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.39■■□□□ 1.02
TRAF5O00463 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRAF5O00463 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRAF5O00463 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAF5O00463 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAF5O00463 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAF5O00463 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRAF5O00463 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAF5O00463 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.39■■□□□ 1.01
TRAF5O00463 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRAF5O00463 AC027612.4-201ENST00000605371 583 ntBASIC21.39■■□□□ 1.01
TRAF5O00463 AC093028.1-201ENST00000622998 982 ntBASIC21.39■■□□□ 1.01
TRAF5O00463 C20orf181-201ENST00000623918 480 ntBASIC21.39■■□□□ 1.01
TRAF5O00463 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.39■■□□□ 1.01
TRAF5O00463 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAF5O00463 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.39■■□□□ 1.01
TRAF5O00463 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
TRAF5O00463 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAF5O00463 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAF5O00463 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.39■■□□□ 1.01
TRAF5O00463 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAF5O00463 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.38■■□□□ 1.01
TRAF5O00463 AC004817.3-201ENST00000602957 2129 ntBASIC21.38■■□□□ 1.01
TRAF5O00463 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAF5O00463 AC002310.6-201ENST00000624451 1377 ntBASIC21.38■■□□□ 1.01
TRAF5O00463 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAF5O00463 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRAF5O00463 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAF5O00463 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAF5O00463 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRAF5O00463 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAF5O00463 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAF5O00463 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAF5O00463 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAF5O00463 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.38■■□□□ 1.01
TRAF5O00463 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAF5O00463 KRT18P41-201ENST00000518924 1277 ntBASIC21.38■■□□□ 1.01
TRAF5O00463 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.38■■□□□ 1.01
TRAF5O00463 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms