Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.22■□□□□ 0.51
AP3B1O00203 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
AP3B1O00203 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
AP3B1O00203 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3B1O00203 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.22■□□□□ 0.51
AP3B1O00203 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.21■□□□□ 0.51
AP3B1O00203 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3B1O00203 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
AP3B1O00203 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
AP3B1O00203 LTB4R2-202ENST00000528054 3092 ntBASIC18.21■□□□□ 0.51
AP3B1O00203 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.21■□□□□ 0.51
AP3B1O00203 KRT18P65-201ENST00000439811 1286 ntBASIC18.21■□□□□ 0.51
AP3B1O00203 RASA4DP-201ENST00000460726 1199 ntBASIC18.21■□□□□ 0.51
AP3B1O00203 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3B1O00203 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.21■□□□□ 0.51
AP3B1O00203 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
AP3B1O00203 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3B1O00203 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.21■□□□□ 0.51
AP3B1O00203 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3B1O00203 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
AP3B1O00203 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.21■□□□□ 0.51
AP3B1O00203 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
AP3B1O00203 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.21■□□□□ 0.5
AP3B1O00203 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
AP3B1O00203 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.2■□□□□ 0.5
AP3B1O00203 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.2■□□□□ 0.5
AP3B1O00203 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.2■□□□□ 0.5
AP3B1O00203 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
AP3B1O00203 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
AP3B1O00203 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 FAM8A6P-201ENST00000407496 1135 ntBASIC18.2■□□□□ 0.5
AP3B1O00203 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.2■□□□□ 0.5
AP3B1O00203 BX664615.1-201ENST00000443558 458 ntBASIC18.2■□□□□ 0.5
AP3B1O00203 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.2■□□□□ 0.5
AP3B1O00203 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.2■□□□□ 0.5
AP3B1O00203 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
AP3B1O00203 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
AP3B1O00203 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.2■□□□□ 0.5
AP3B1O00203 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
AP3B1O00203 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
AP3B1O00203 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
AP3B1O00203 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
AP3B1O00203 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3B1O00203 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3B1O00203 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.19■□□□□ 0.5
AP3B1O00203 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3B1O00203 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3B1O00203 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3B1O00203 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3B1O00203 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3B1O00203 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3B1O00203 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3B1O00203 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.19■□□□□ 0.5
AP3B1O00203 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.19■□□□□ 0.5
AP3B1O00203 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3B1O00203 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3B1O00203 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3B1O00203 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
AP3B1O00203 AC005363.2-201ENST00000618631 242 ntBASIC18.19■□□□□ 0.5
AP3B1O00203 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3B1O00203 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3B1O00203 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms