Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 KRT16P4-201ENST00000453883 522 ntBASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 AC008687.5-201ENST00000593746 558 ntBASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 AL031008.1-201ENST00000619963 541 ntBASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 FP475955.4-201ENST00000623131 1990 ntBASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMX2-CTNND1H3BSU7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 AC104692.2-201ENST00000603054 253 ntBASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMX2-CTNND1H3BSU7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 AC099336.1-202ENST00000602961 463 ntBASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 AL121912.1-201ENST00000603683 238 ntBASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 AC064862.7-201ENST00000604520 867 ntBASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 AL592071.1-201ENST00000611956 408 ntBASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 AC124864.1-201ENST00000623408 392 ntBASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 AL031598.1-201ENST00000561511 1773 ntBASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TMX2-CTNND1H3BSU7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMX2-CTNND1H3BSU7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.65■□□□□ 0.42
TMX2-CTNND1H3BSU7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMX2-CTNND1H3BSU7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.65■□□□□ 0.42
TMX2-CTNND1H3BSU7 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.65■□□□□ 0.42
TMX2-CTNND1H3BSU7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms