Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 AC104819.1-201ENST00000504587 486 ntBASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 AC012313.10-201ENST00000623509 926 ntBASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 AC007613.1-201ENST00000572811 2597 ntBASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
YJEFN3A6XGL0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 NSUN5P1-202ENST00000421140 1535 ntBASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 NSUN5P2-203ENST00000457352 1529 ntBASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
YJEFN3A6XGL0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
YJEFN3A6XGL0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
YJEFN3A6XGL0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms