Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 AC011840.4-201ENST00000578471 627 ntBASIC14.2□□□□□ -0.14
LINC01548A6NM66 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 AC012313.10-201ENST00000623509 926 ntBASIC14.2□□□□□ -0.14
LINC01548A6NM66 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 AC233702.3-201ENST00000578656 1387 ntBASIC14.2□□□□□ -0.14
LINC01548A6NM66 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
LINC01548A6NM66 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01548A6NM66 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 AC018470.1-201ENST00000624790 3129 ntBASIC14.19□□□□□ -0.14
LINC01548A6NM66 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 AC100803.2-201ENST00000562459 1963 ntBASIC14.19□□□□□ -0.14
LINC01548A6NM66 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC01548A6NM66 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LINC01548A6NM66 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC01548A6NM66 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC01548A6NM66 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms