Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 ELL2P1-201ENST00000413990 1906 ntBASIC27.55■■■□□ 2
PLEKHD1A6NEE1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 RPS15P9-201ENST00000494093 319 ntBASIC27.55■■■□□ 2
PLEKHD1A6NEE1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 AL049757.1-201ENST00000616842 1596 ntBASIC27.55■■■□□ 2
PLEKHD1A6NEE1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC27.55■■■□□ 2
PLEKHD1A6NEE1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 CD82-202ENST00000342935 967 ntTSL 5 BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 NCF1C-201ENST00000438382 1427 ntBASIC27.54■■■□□ 2
PLEKHD1A6NEE1 AP002472.1-201ENST00000577490 586 ntBASIC27.54■■■□□ 2
PLEKHD1A6NEE1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 AC004790.2-201ENST00000623588 572 ntBASIC27.54■■■□□ 2
PLEKHD1A6NEE1 AC148477.5-201ENST00000625164 1645 ntBASIC27.54■■■□□ 2
PLEKHD1A6NEE1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
PLEKHD1A6NEE1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 SIRPAP1-201ENST00000448467 1770 ntBASIC27.53■■■□□ 2
PLEKHD1A6NEE1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 GPR89P-201ENST00000407924 1495 ntBASIC27.53■■■□□ 2
PLEKHD1A6NEE1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 AL078644.1-201ENST00000609881 752 ntBASIC27.53■■■□□ 2
PLEKHD1A6NEE1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC27.53■■■□□ 2
PLEKHD1A6NEE1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC27.52■■■□□ 2
PLEKHD1A6NEE1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
PLEKHD1A6NEE1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC27.51■■■□□ 2
PLEKHD1A6NEE1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 AC093010.1-201ENST00000473625 1624 ntBASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC27.51■■□□□ 1.99
PLEKHD1A6NEE1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 CEND1P1-201ENST00000451006 455 ntBASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 DUTP2-201ENST00000519164 463 ntBASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC27.5■■□□□ 1.99
PLEKHD1A6NEE1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms