Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 MTDHP1-201ENST00000605323 784 ntBASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 AL445675.2-201ENST00000620291 557 ntBASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 AL023875.1-201ENST00000640777 796 ntBASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MEIS3P1A6NDR6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 KRT18P55-202ENST00000578578 1546 ntBASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
MEIS3P1A6NDR6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MEIS3P1A6NDR6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
MEIS3P1A6NDR6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.46■□□□□ 0.06
MEIS3P1A6NDR6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
MEIS3P1A6NDR6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MEIS3P1A6NDR6 CROCCP2-202ENST00000412962 2773 ntBASIC15.46■□□□□ 0.06
MEIS3P1A6NDR6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.46■□□□□ 0.06
MEIS3P1A6NDR6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MEIS3P1A6NDR6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MEIS3P1A6NDR6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 MIR564-202ENST00000385049 94 ntBASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 AC004951.3-201ENST00000418645 1148 ntBASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 AC233263.1-201ENST00000578059 224 ntBASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 AC008403.3-201ENST00000598924 454 ntBASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 AC008622.2-201ENST00000617006 1229 ntBASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MEIS3P1A6NDR6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
MEIS3P1A6NDR6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms