Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SBNO1A3KN83 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SBNO1A3KN83 PRSS29P-201ENST00000440800 595 ntBASIC24.26■■□□□ 1.47
SBNO1A3KN83 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 IGHV3-65-201ENST00000523210 341 ntBASIC24.26■■□□□ 1.47
SBNO1A3KN83 CFL1-212ENST00000531413 636 ntTSL 3 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 AC018845.2-201ENST00000568326 409 ntBASIC24.26■■□□□ 1.47
SBNO1A3KN83 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 AL078644.1-201ENST00000609881 752 ntBASIC24.26■■□□□ 1.47
SBNO1A3KN83 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SBNO1A3KN83 KRT8P47-201ENST00000604727 1398 ntBASIC24.26■■□□□ 1.47
SBNO1A3KN83 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
SBNO1A3KN83 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SBNO1A3KN83 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SBNO1A3KN83 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 AC005082.1-201ENST00000413042 2259 ntBASIC24.25■■□□□ 1.47
SBNO1A3KN83 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SBNO1A3KN83 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SBNO1A3KN83 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SBNO1A3KN83 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 CIPC-205ENST00000555437 566 ntTSL 3 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 AC008667.4-201ENST00000607370 168 ntBASIC24.25■■□□□ 1.47
SBNO1A3KN83 AC073592.5-201ENST00000624854 528 ntBASIC24.25■■□□□ 1.47
SBNO1A3KN83 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC24.25■■□□□ 1.47
SBNO1A3KN83 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SBNO1A3KN83 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SBNO1A3KN83 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 ADM-208ENST00000534464 1640 ntTSL 2 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC24.24■■□□□ 1.47
SBNO1A3KN83 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SBNO1A3KN83 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC24.23■■□□□ 1.47
SBNO1A3KN83 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SBNO1A3KN83 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SBNO1A3KN83 CALY-203ENST00000368558 825 ntTSL 5 BASIC24.23■■□□□ 1.47
SBNO1A3KN83 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC24.23■■□□□ 1.47
SBNO1A3KN83 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC24.23■■□□□ 1.47
SBNO1A3KN83 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC24.23■■□□□ 1.47
SBNO1A3KN83 MIR4751-201ENST00000578027 74 ntBASIC24.23■■□□□ 1.47
SBNO1A3KN83 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC24.23■■□□□ 1.47
SBNO1A3KN83 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC24.23■■□□□ 1.47
SBNO1A3KN83 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SBNO1A3KN83 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SBNO1A3KN83 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC24.23■■□□□ 1.47
SBNO1A3KN83 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
SBNO1A3KN83 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SBNO1A3KN83 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
SBNO1A3KN83 GPR89P-201ENST00000407924 1495 ntBASIC24.22■■□□□ 1.47
SBNO1A3KN83 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SBNO1A3KN83 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SBNO1A3KN83 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC24.22■■□□□ 1.47
SBNO1A3KN83 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.22■■□□□ 1.47
SBNO1A3KN83 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SBNO1A3KN83 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SBNO1A3KN83 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
SBNO1A3KN83 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC24.22■■□□□ 1.47
SBNO1A3KN83 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC24.22■■□□□ 1.47
SBNO1A3KN83 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SBNO1A3KN83 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SBNO1A3KN83 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SBNO1A3KN83 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC24.22■■□□□ 1.47
SBNO1A3KN83 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SBNO1A3KN83 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC24.21■■□□□ 1.47
SBNO1A3KN83 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SBNO1A3KN83 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SBNO1A3KN83 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC24.21■■□□□ 1.47
SBNO1A3KN83 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SBNO1A3KN83 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SBNO1A3KN83 IGLL3P-201ENST00000412472 434 ntBASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms