Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 AC092329.2-201ENST00000598402 547 ntBASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 AC134043.2-201ENST00000624206 2238 ntBASIC21.19■□□□□ 0.98
PTPDC1A2A3K4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 TSPY22P-201ENST00000427496 604 ntBASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 SLC25A6P5-201ENST00000435663 894 ntBASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 RNF126P1-202ENST00000569893 925 ntBASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 AL121894.2-201ENST00000602977 491 ntBASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPDC1A2A3K4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 AL450487.1-201ENST00000426799 995 ntBASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 PVRIG2P-201ENST00000435460 978 ntBASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.17■□□□□ 0.98
PTPDC1A2A3K4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 AC132938.6-201ENST00000623828 1655 ntBASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PTPDC1A2A3K4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PTPDC1A2A3K4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PTPDC1A2A3K4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPDC1A2A3K4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPDC1A2A3K4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.15■□□□□ 0.98
PTPDC1A2A3K4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPDC1A2A3K4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PTPDC1A2A3K4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PTPDC1A2A3K4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms