Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC005332.3-201ENST00000589904 676 ntBASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 BCL2-203ENST00000589955 5011 ntBASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 RNF126P1-202ENST00000569893 925 ntBASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 NPAP1P7-201ENST00000613027 823 ntBASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AL353692.3-201ENST00000407031 1396 ntBASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 NOC2LP1-202ENST00000452600 2235 ntBASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AL390719.2-201ENST00000606993 987 ntBASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms