Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 LINC00602-201ENST00000629776 2065 ntBASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV9-2A0A087WT02 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 PTBP1P-201ENST00000554374 1601 ntBASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 AC008741.2-201ENST00000612792 3115 ntBASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 AL359736.2-201ENST00000621992 437 ntBASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 AL023875.1-201ENST00000640777 796 ntBASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV9-2A0A087WT02 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV9-2A0A087WT02 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.46□□□□□ -0.26
TRAV9-2A0A087WT02 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
TRAV9-2A0A087WT02 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.46□□□□□ -0.26
TRAV9-2A0A087WT02 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV9-2A0A087WT02 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV9-2A0A087WT02 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRAV9-2A0A087WT02 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TRAV9-2A0A087WT02 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
TRAV9-2A0A087WT02 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 KRASP1-201ENST00000407852 552 ntBASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms