Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN10AQ9Y5Y9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AC211486.1-202ENST00000416371 468 ntBASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 HCG4B-203ENST00000450128 991 ntBASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AC211476.1-201ENST00000503899 468 ntBASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AC018845.2-201ENST00000568326 409 ntBASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 MIR3687-2-201ENST00000577708 61 ntBASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 MIR3687-1-201ENST00000614492 61 ntBASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AL589182.2-201ENST00000619332 1049 ntBASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AC132938.5-201ENST00000624980 1813 ntBASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN10AQ9Y5Y9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 AL355385.1-201ENST00000606123 409 ntBASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN10AQ9Y5Y9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 DUTP2-201ENST00000519164 463 ntBASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN10AQ9Y5Y9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms