Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 AL022326.1-202ENST00000641533 845 ntBASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHAC2Q9Y5I4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHAC2Q9Y5I4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHAC2Q9Y5I4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.33■■□□□ 1
PCDHAC2Q9Y5I4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.33■■□□□ 1
PCDHAC2Q9Y5I4 SIRPAP1-201ENST00000448467 1770 ntBASIC21.33■■□□□ 1
PCDHAC2Q9Y5I4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHAC2Q9Y5I4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
PCDHAC2Q9Y5I4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHAC2Q9Y5I4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.33■■□□□ 1
PCDHAC2Q9Y5I4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 HMGN1P19-201ENST00000436976 333 ntBASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 AC040169.1-201ENST00000565382 521 ntBASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 AC073592.4-201ENST00000623827 446 ntBASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHAC2Q9Y5I4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 AC134684.3-201ENST00000641758 218 ntBASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHAC2Q9Y5I4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 AC064836.3-201ENST00000607928 673 ntBASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 SLC25A24-204ENST00000569674 2357 ntBASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHAC2Q9Y5I4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 AC093010.1-201ENST00000473625 1624 ntBASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 AC148477.5-201ENST00000625164 1645 ntBASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDHAC2Q9Y5I4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms