Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 EMBP1-201ENST00000458200 901 ntBASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 AC007613.1-201ENST00000572811 2597 ntBASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB1Q9Y5F3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 KRT18P1-202ENST00000452408 1331 ntBASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 CHCHD2P8-201ENST00000429873 447 ntBASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 NUS1P1-201ENST00000446295 882 ntBASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB1Q9Y5F3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB1Q9Y5F3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB1Q9Y5F3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.02■□□□□ 0.47
PCDHB1Q9Y5F3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.02■□□□□ 0.47
PCDHB1Q9Y5F3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB1Q9Y5F3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB1Q9Y5F3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB1Q9Y5F3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PCDHB1Q9Y5F3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 AL031008.1-201ENST00000619963 541 ntBASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB1Q9Y5F3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHB1Q9Y5F3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms