Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC138028.4-201ENST00000564984 1845 ntBASIC18.12■□□□□ 0.49
PKP3Q9Y446 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 AL031133.1-201ENST00000406807 723 ntBASIC18.11■□□□□ 0.49
PKP3Q9Y446 AL645929.1-201ENST00000420084 975 ntBASIC18.11■□□□□ 0.49
PKP3Q9Y446 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 FLJ13224-201ENST00000313737 1514 ntBASIC18.11■□□□□ 0.49
PKP3Q9Y446 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.11■□□□□ 0.49
PKP3Q9Y446 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PKP3Q9Y446 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP3Q9Y446 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.1■□□□□ 0.49
PKP3Q9Y446 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PKP3Q9Y446 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PKP3Q9Y446 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP3Q9Y446 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.1■□□□□ 0.49
PKP3Q9Y446 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PKP3Q9Y446 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PKP3Q9Y446 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
PKP3Q9Y446 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.1■□□□□ 0.49
PKP3Q9Y446 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.1■□□□□ 0.49
PKP3Q9Y446 IGHGP-201ENST00000390555 1178 ntBASIC18.1■□□□□ 0.49
PKP3Q9Y446 GPR32P1-201ENST00000601788 811 ntBASIC18.1■□□□□ 0.49
PKP3Q9Y446 AL121956.5-201ENST00000625261 221 ntBASIC18.1■□□□□ 0.49
PKP3Q9Y446 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP3Q9Y446 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP3Q9Y446 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP3Q9Y446 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PKP3Q9Y446 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PKP3Q9Y446 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
PKP3Q9Y446 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PKP3Q9Y446 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 SPDYE13P-201ENST00000445314 798 ntBASIC18.09■□□□□ 0.49
PKP3Q9Y446 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 AL136038.3-201ENST00000561909 1096 ntBASIC18.09■□□□□ 0.49
PKP3Q9Y446 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 AC004263.2-201ENST00000617183 678 ntBASIC18.09■□□□□ 0.49
PKP3Q9Y446 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PKP3Q9Y446 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PKP3Q9Y446 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms