Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 KRT89P-201ENST00000620027 1478 ntBASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF3C4Q9UKN8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 MIR3180-1-201ENST00000580374 94 ntBASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 MIR3180-3-201ENST00000584616 94 ntBASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 AC092329.2-201ENST00000598402 547 ntBASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF3C4Q9UKN8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GTF3C4Q9UKN8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
GTF3C4Q9UKN8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GTF3C4Q9UKN8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
GTF3C4Q9UKN8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 AP002414.4-201ENST00000589764 1148 ntBASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 AL024508.2-201ENST00000607749 1894 ntBASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF3C4Q9UKN8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 KRT18P1-202ENST00000452408 1331 ntBASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF3C4Q9UKN8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GTF3C4Q9UKN8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms