Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 AC116407.4-201ENST00000623319 1061 ntBASIC15.26■□□□□ 0.03
CLN8Q9UBY8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLN8Q9UBY8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 SPDYE13P-201ENST00000445314 798 ntBASIC15.25■□□□□ 0.03
CLN8Q9UBY8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 ABALON-201ENST00000629058 1903 ntBASIC15.25■□□□□ 0.03
CLN8Q9UBY8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLN8Q9UBY8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 MIR662-201ENST00000384847 95 ntBASIC15.24■□□□□ 0.03
CLN8Q9UBY8 KRT18P48-201ENST00000434763 852 ntBASIC15.24■□□□□ 0.03
CLN8Q9UBY8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 AC008687.5-201ENST00000593746 558 ntBASIC15.24■□□□□ 0.03
CLN8Q9UBY8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.24■□□□□ 0.03
CLN8Q9UBY8 AC069148.1-201ENST00000608741 768 ntBASIC15.24■□□□□ 0.03
CLN8Q9UBY8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLN8Q9UBY8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms