Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 GAPDHP21-201ENST00000450301 1010 ntBASIC18.99■□□□□ 0.63
CHD7Q9P2D1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHD7Q9P2D1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.98■□□□□ 0.63
CHD7Q9P2D1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 AC004706.3-202ENST00000621574 984 ntBASIC18.98■□□□□ 0.63
CHD7Q9P2D1 AD001527.2-201ENST00000622994 785 ntBASIC18.98■□□□□ 0.63
CHD7Q9P2D1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD7Q9P2D1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 MIR661-201ENST00000384842 89 ntBASIC18.97■□□□□ 0.63
CHD7Q9P2D1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 AC087641.1-201ENST00000557561 1021 ntBASIC18.97■□□□□ 0.63
CHD7Q9P2D1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 AC132938.5-201ENST00000624980 1813 ntBASIC18.97■□□□□ 0.63
CHD7Q9P2D1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD7Q9P2D1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 AC007274.1-201ENST00000439805 662 ntBASIC18.96■□□□□ 0.63
CHD7Q9P2D1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 AC004877.2-201ENST00000623941 599 ntBASIC18.96■□□□□ 0.63
CHD7Q9P2D1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 AC096633.1-201ENST00000422446 749 ntBASIC18.96■□□□□ 0.63
CHD7Q9P2D1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 AC010507.1-201ENST00000633895 436 ntBASIC18.96■□□□□ 0.63
CHD7Q9P2D1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD7Q9P2D1 IGHV3-65-201ENST00000523210 341 ntBASIC18.96■□□□□ 0.63
CHD7Q9P2D1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms