Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AL024508.2-201ENST00000607749 1894 ntBASIC16.3■□□□□ 0.2
HINT3Q9NQE9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HINT3Q9NQE9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 KRT18P22-201ENST00000402024 1347 ntBASIC16.29■□□□□ 0.2
HINT3Q9NQE9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 EGLN1P1-201ENST00000531623 762 ntBASIC16.29■□□□□ 0.2
HINT3Q9NQE9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 AC145285.6-201ENST00000604632 637 ntBASIC16.29■□□□□ 0.2
HINT3Q9NQE9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 AC012306.2-201ENST00000609350 630 ntBASIC16.29■□□□□ 0.2
HINT3Q9NQE9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.29■□□□□ 0.2
HINT3Q9NQE9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HINT3Q9NQE9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms