Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NLRC4Q9NPP4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 AC100803.2-201ENST00000562459 1963 ntBASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.56■□□□□ 0.72
NLRC4Q9NPP4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 MIR3917-201ENST00000580971 93 ntBASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 LINC01568-207ENST00000641790 1380 ntBASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.55■□□□□ 0.72
NLRC4Q9NPP4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 PP12613-201ENST00000424958 2230 ntBASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 AC093827.2-201ENST00000512654 315 ntBASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 AL157888.1-201ENST00000631930 593 ntBASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NLRC4Q9NPP4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms