Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 ESPNP-201ENST00000270691 2015 ntBASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 AC233702.3-201ENST00000578656 1387 ntBASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 AC246785.2-201ENST00000432512 513 ntBASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 PRELID1P1-202ENST00000567272 903 ntBASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 AC009154.2-201ENST00000621177 724 ntBASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 LINC00602-201ENST00000629776 2065 ntBASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MKKSQ9NPJ1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 AC104819.1-201ENST00000504587 486 ntBASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MKKSQ9NPJ1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 PKD1P1-201ENST00000458669 6805 ntBASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 KRT18P65-201ENST00000439811 1286 ntBASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 DUSP5P1-201ENST00000441325 1139 ntBASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 NUS1P1-201ENST00000446295 882 ntBASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 KRT126P-201ENST00000549467 1181 ntBASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MKKSQ9NPJ1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms