Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20AQ9NP66 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMG20AQ9NP66 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HMG20AQ9NP66 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 KRT8P8-201ENST00000434750 1448 ntBASIC16.42■□□□□ 0.22
HMG20AQ9NP66 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMG20AQ9NP66 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 UNC93B4-201ENST00000505679 747 ntBASIC16.41■□□□□ 0.22
HMG20AQ9NP66 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 AC006116.8-202ENST00000587620 1550 ntBASIC16.41■□□□□ 0.22
HMG20AQ9NP66 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMG20AQ9NP66 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 AL355802.2-201ENST00000402069 882 ntBASIC16.4■□□□□ 0.22
HMG20AQ9NP66 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.4■□□□□ 0.22
HMG20AQ9NP66 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms