Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 AC006538.3-201ENST00000612495 578 ntBASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.02■□□□□ 0.48
TM9SF3Q9HD45 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.02■□□□□ 0.47
TM9SF3Q9HD45 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM9SF3Q9HD45 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.47
TM9SF3Q9HD45 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM9SF3Q9HD45 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TM9SF3Q9HD45 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.02■□□□□ 0.47
TM9SF3Q9HD45 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TM9SF3Q9HD45 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 AL671883.3-201ENST00000603274 991 ntBASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 AC020763.4-201ENST00000623414 4170 ntBASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 AL031598.1-201ENST00000561511 1773 ntBASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TM9SF3Q9HD45 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 AC135050.7-201ENST00000624508 2218 ntBASIC18■□□□□ 0.47
TM9SF3Q9HD45 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 AC099343.3-201ENST00000605834 2503 ntBASIC18■□□□□ 0.47
TM9SF3Q9HD45 AL390961.4-201ENST00000623958 2535 ntBASIC18■□□□□ 0.47
TM9SF3Q9HD45 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 MED22-202ENST00000371999 987 ntTSL 3 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 KRT18P67-201ENST00000432816 1264 ntBASIC18■□□□□ 0.47
TM9SF3Q9HD45 AC132008.2-207ENST00000454517 770 ntBASIC18■□□□□ 0.47
TM9SF3Q9HD45 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 AC090164.3-201ENST00000610780 2143 ntBASIC18■□□□□ 0.47
TM9SF3Q9HD45 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18■□□□□ 0.47
TM9SF3Q9HD45 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18■□□□□ 0.47
TM9SF3Q9HD45 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 IL9RP2-201ENST00000423948 1312 ntBASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 AC020916.1-201ENST00000587762 1774 ntBASIC17.99■□□□□ 0.47
TM9SF3Q9HD45 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms