Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
VCX3BQ9H321 AL355472.2-201ENST00000422958 438 ntBASIC17.2■□□□□ 0.34
VCX3BQ9H321 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
VCX3BQ9H321 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VCX3BQ9H321 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.2■□□□□ 0.34
VCX3BQ9H321 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.2■□□□□ 0.34
VCX3BQ9H321 LINC00554-201ENST00000564841 3011 ntBASIC17.2■□□□□ 0.34
VCX3BQ9H321 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 PHGDH-209ENST00000641074 1780 ntBASIC17.2■□□□□ 0.34
VCX3BQ9H321 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.2■□□□□ 0.34
VCX3BQ9H321 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 AC133963.1-201ENST00000504166 1679 ntBASIC17.19■□□□□ 0.34
VCX3BQ9H321 AL355312.1-201ENST00000407115 2176 ntBASIC17.19■□□□□ 0.34
VCX3BQ9H321 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
VCX3BQ9H321 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCX3BQ9H321 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 AC106886.4-201ENST00000623557 2502 ntBASIC17.18■□□□□ 0.34
VCX3BQ9H321 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 AC123595.1-201ENST00000440769 1046 ntBASIC17.18■□□□□ 0.34
VCX3BQ9H321 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 AL121906.2-201ENST00000621597 723 ntBASIC17.18■□□□□ 0.34
VCX3BQ9H321 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.18■□□□□ 0.34
VCX3BQ9H321 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VCX3BQ9H321 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VCX3BQ9H321 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.17■□□□□ 0.34
VCX3BQ9H321 AC069236.1-201ENST00000604339 616 ntBASIC17.17■□□□□ 0.34
VCX3BQ9H321 RAP2CP1-201ENST00000605103 478 ntBASIC17.17■□□□□ 0.34
VCX3BQ9H321 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms