Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
POLR2J3Q9H1A7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 AL645608.8-201ENST00000606034 2086 ntBASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 TSPY14P-201ENST00000303979 915 ntBASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 AL512604.3-201ENST00000569583 964 ntBASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
POLR2J3Q9H1A7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 AC008550.1-201ENST00000511500 884 ntBASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 AC006116.8-202ENST00000587620 1550 ntBASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 KRT17P2-201ENST00000300992 1314 ntBASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
POLR2J3Q9H1A7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 AC128688.1-201ENST00000487626 519 ntBASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 DUTP2-201ENST00000519164 463 ntBASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 EGLN1P1-201ENST00000531623 762 ntBASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 AP000525.1-201ENST00000608286 694 ntBASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
POLR2J3Q9H1A7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms