Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX47Q9H0S4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 CRYGFP-201ENST00000418459 633 ntBASIC18.79■□□□□ 0.6
DDX47Q9H0S4 NUDT16P1-203ENST00000513809 620 ntBASIC18.79■□□□□ 0.6
DDX47Q9H0S4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 AL359736.2-201ENST00000621992 437 ntBASIC18.79■□□□□ 0.6
DDX47Q9H0S4 FAM197Y4-202ENST00000622692 608 ntBASIC18.79■□□□□ 0.6
DDX47Q9H0S4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX47Q9H0S4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.78■□□□□ 0.6
DDX47Q9H0S4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 KRT8P7-201ENST00000533003 1432 ntBASIC18.78■□□□□ 0.6
DDX47Q9H0S4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.78■□□□□ 0.6
DDX47Q9H0S4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 AC132938.6-201ENST00000623828 1655 ntBASIC18.78■□□□□ 0.6
DDX47Q9H0S4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX47Q9H0S4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.77■□□□□ 0.6
DDX47Q9H0S4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 AC133963.1-201ENST00000504166 1679 ntBASIC18.77■□□□□ 0.6
DDX47Q9H0S4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.77■□□□□ 0.6
DDX47Q9H0S4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DDX47Q9H0S4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX47Q9H0S4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX47Q9H0S4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX47Q9H0S4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms