Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 LINC02560-201ENST00000596379 459 ntBASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 SMG8-203ENST00000578922 2178 ntBASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNTNAP3Q9BZ76 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 UGT1A2P-201ENST00000454886 866 ntBASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 AC008761.3-201ENST00000624803 892 ntBASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 AL513210.1-201ENST00000629608 234 ntBASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 AP001271.2-201ENST00000624018 1556 ntBASIC17.11■□□□□ 0.33
CNTNAP3Q9BZ76 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 AC004461.1-201ENST00000412461 403 ntBASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 NME2P1-201ENST00000426182 414 ntBASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 KRT18P27-201ENST00000427733 1299 ntBASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 FP700111.2-201ENST00000619190 1892 ntBASIC17.1■□□□□ 0.33
CNTNAP3Q9BZ76 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.09■□□□□ 0.33
CNTNAP3Q9BZ76 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms