Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 LHX6-205ENST00000464484 666 ntTSL 2 BASIC25.72■■□□□ 1.71
SCAF11Q99590 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC25.72■■□□□ 1.71
SCAF11Q99590 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC25.72■■□□□ 1.71
SCAF11Q99590 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC25.72■■□□□ 1.71
SCAF11Q99590 AC106028.4-201ENST00000614509 607 ntBASIC25.72■■□□□ 1.71
SCAF11Q99590 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
SCAF11Q99590 AC099343.3-201ENST00000605834 2503 ntBASIC25.72■■□□□ 1.71
SCAF11Q99590 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
SCAF11Q99590 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
SCAF11Q99590 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
SCAF11Q99590 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SCAF11Q99590 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SCAF11Q99590 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SCAF11Q99590 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC25.72■■□□□ 1.71
SCAF11Q99590 PMPCAP1-201ENST00000508114 1576 ntBASIC25.72■■□□□ 1.71
SCAF11Q99590 AC112698.1-201ENST00000510299 916 ntBASIC25.72■■□□□ 1.71
SCAF11Q99590 TCAP-202ENST00000578283 583 ntTSL 5 BASIC25.72■■□□□ 1.71
SCAF11Q99590 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
SCAF11Q99590 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
SCAF11Q99590 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC25.72■■□□□ 1.71
SCAF11Q99590 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC25.72■■□□□ 1.71
SCAF11Q99590 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC25.72■■□□□ 1.71
SCAF11Q99590 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC25.71■■□□□ 1.71
SCAF11Q99590 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC25.71■■□□□ 1.71
SCAF11Q99590 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF11Q99590 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF11Q99590 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC25.71■■□□□ 1.71
SCAF11Q99590 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF11Q99590 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC25.71■■□□□ 1.71
SCAF11Q99590 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SCAF11Q99590 SNCG-201ENST00000348795 684 ntTSL 2 BASIC25.71■■□□□ 1.71
SCAF11Q99590 SYS1-203ENST00000414310 795 ntTSL 3 BASIC25.71■■□□□ 1.71
SCAF11Q99590 ELK2BP-201ENST00000415014 1224 ntBASIC25.71■■□□□ 1.71
SCAF11Q99590 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC25.71■■□□□ 1.71
SCAF11Q99590 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC25.71■■□□□ 1.71
SCAF11Q99590 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC25.71■■□□□ 1.71
SCAF11Q99590 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC25.71■■□□□ 1.71
SCAF11Q99590 AC239800.4-201ENST00000603712 296 ntBASIC25.71■■□□□ 1.71
SCAF11Q99590 ELL2P1-201ENST00000413990 1906 ntBASIC25.71■■□□□ 1.71
SCAF11Q99590 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
SCAF11Q99590 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC25.71■■□□□ 1.71
SCAF11Q99590 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.71
SCAF11Q99590 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SCAF11Q99590 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
SCAF11Q99590 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 SIGLEC16-201ENST00000599858 1437 ntBASIC25.7■■□□□ 1.7
SCAF11Q99590 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SCAF11Q99590 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 CD9-202ENST00000382515 1229 ntTSL 5 BASIC25.7■■□□□ 1.7
SCAF11Q99590 SLC4A1APP2-201ENST00000424054 1259 ntBASIC25.7■■□□□ 1.7
SCAF11Q99590 AC007967.3-201ENST00000434308 558 ntBASIC25.7■■□□□ 1.7
SCAF11Q99590 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
SCAF11Q99590 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC25.7■■□□□ 1.7
SCAF11Q99590 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SCAF11Q99590 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF11Q99590 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC25.69■■□□□ 1.7
SCAF11Q99590 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
SCAF11Q99590 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC25.69■■□□□ 1.7
SCAF11Q99590 LINC01126-201ENST00000623515 1646 ntBASIC25.69■■□□□ 1.7
SCAF11Q99590 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF11Q99590 ATP6V0CP3-201ENST00000417255 467 ntBASIC25.69■■□□□ 1.7
SCAF11Q99590 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SCAF11Q99590 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF11Q99590 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SCAF11Q99590 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SCAF11Q99590 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF11Q99590 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SCAF11Q99590 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC25.69■■□□□ 1.7
SCAF11Q99590 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF11Q99590 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC25.69■■□□□ 1.7
SCAF11Q99590 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC25.69■■□□□ 1.7
SCAF11Q99590 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF11Q99590 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF11Q99590 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC25.68■■□□□ 1.7
SCAF11Q99590 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC25.68■■□□□ 1.7
SCAF11Q99590 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF11Q99590 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF11Q99590 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF11Q99590 AL513190.1-201ENST00000621254 727 ntBASIC25.68■■□□□ 1.7
SCAF11Q99590 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms