Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP1Q96SZ6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 TP73-AS1-210ENST00000637775 1455 ntBASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 AC135776.1-201ENST00000319817 2481 ntBASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CDK5RAP1Q96SZ6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 RN7SL510P-201ENST00000581311 263 ntBASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 AL591684.3-201ENST00000605187 298 ntBASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 AC116407.2-201ENST00000613639 860 ntBASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 LETM1P2-201ENST00000597330 2178 ntBASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CDK5RAP1Q96SZ6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDK5RAP1Q96SZ6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDK5RAP1Q96SZ6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CDK5RAP1Q96SZ6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 AC096633.1-201ENST00000422446 749 ntBASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 MIR5100-201ENST00000579544 119 ntBASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 AC011467.2-201ENST00000598425 242 ntBASIC18.64■□□□□ 0.57
CDK5RAP1Q96SZ6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms