Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM47Q96LD4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TRIM47Q96LD4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 HCG11-201ENST00000411553 5696 ntBASIC21.05■□□□□ 0.96
TRIM47Q96LD4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 SCARNA2-201ENST00000458748 420 ntBASIC21.05■□□□□ 0.96
TRIM47Q96LD4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM47Q96LD4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 LINC02084-201ENST00000606069 1096 ntBASIC21.04■□□□□ 0.96
TRIM47Q96LD4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM47Q96LD4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 Z98044.1-201ENST00000632503 1764 ntBASIC21.03■□□□□ 0.96
TRIM47Q96LD4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 RCN1P2-201ENST00000398357 915 ntBASIC21.03■□□□□ 0.96
TRIM47Q96LD4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM47Q96LD4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM47Q96LD4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms