Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 AC138028.4-201ENST00000564984 1845 ntBASIC18■□□□□ 0.47
ECHDC3Q96DC8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ECHDC3Q96DC8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ECHDC3Q96DC8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 AC097374.2-201ENST00000618617 1306 ntBASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 TSPY19P-201ENST00000418461 509 ntBASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 TSPY18P-201ENST00000441642 509 ntBASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 PRELID1P1-202ENST00000567272 903 ntBASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 AC099336.1-202ENST00000602961 463 ntBASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ECHDC3Q96DC8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 POM121L3P-201ENST00000419331 1163 ntBASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 AC096633.1-201ENST00000422446 749 ntBASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 MINOS1P3-201ENST00000457048 203 ntBASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ECHDC3Q96DC8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 AC100803.2-201ENST00000562459 1963 ntBASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.97■□□□□ 0.47
ECHDC3Q96DC8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms