Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 AL035252.4-201ENST00000624174 288 ntBASIC19.21■□□□□ 0.67
TIFAQ96CG3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TIFAQ96CG3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIFAQ96CG3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIFAQ96CG3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.2■□□□□ 0.66
TIFAQ96CG3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 AC005034.1-201ENST00000426657 489 ntBASIC19.2■□□□□ 0.66
TIFAQ96CG3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 PRYP5-201ENST00000451909 266 ntBASIC19.2■□□□□ 0.66
TIFAQ96CG3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 AC073592.4-201ENST00000623827 446 ntBASIC19.2■□□□□ 0.66
TIFAQ96CG3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIFAQ96CG3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TIFAQ96CG3 PMPCAP1-201ENST00000508114 1576 ntBASIC19.19■□□□□ 0.66
TIFAQ96CG3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 AC099343.3-201ENST00000605834 2503 ntBASIC19.19■□□□□ 0.66
TIFAQ96CG3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 AC108073.2-201ENST00000464002 357 ntBASIC19.19■□□□□ 0.66
TIFAQ96CG3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.19■□□□□ 0.66
TIFAQ96CG3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 MTMR9LP-203ENST00000426597 1545 ntBASIC19.19■□□□□ 0.66
TIFAQ96CG3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.19■□□□□ 0.66
TIFAQ96CG3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TIFAQ96CG3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 AC112698.1-201ENST00000510299 916 ntBASIC19.18■□□□□ 0.66
TIFAQ96CG3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.18■□□□□ 0.66
TIFAQ96CG3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIFAQ96CG3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms