Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC009154.2-201ENST00000621177 724 ntBASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHKBP1Q8TBC3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 TP73-AS1-210ENST00000637775 1455 ntBASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 LINC00602-201ENST00000629776 2065 ntBASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 FAM197Y8-203ENST00000450145 560 ntBASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 AC120114.3-201ENST00000611923 658 ntBASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHKBP1Q8TBC3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.89■□□□□ 0.62
SHKBP1Q8TBC3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SHKBP1Q8TBC3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SHKBP1Q8TBC3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SHKBP1Q8TBC3 AIRN-201ENST00000601203 4374 ntBASIC18.89■□□□□ 0.62
SHKBP1Q8TBC3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 MTCL1P1-201ENST00000446207 792 ntBASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 AC064862.7-201ENST00000604520 867 ntBASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 AC008608.2-201ENST00000606089 416 ntBASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHKBP1Q8TBC3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 AL590627.1-203ENST00000421194 1026 ntBASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 BX640515.1-201ENST00000617215 977 ntBASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 AL773604.1-201ENST00000617417 272 ntBASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 AC148477.8-201ENST00000624298 468 ntBASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SHKBP1Q8TBC3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms