Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 KRT18P35-201ENST00000510488 1269 ntBASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 AC024563.2-201ENST00000603282 481 ntBASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCLL1Q8TB92 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 SIRPAP1-201ENST00000448467 1770 ntBASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 AC113404.2-201ENST00000507884 177 ntBASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 AL445228.2-201ENST00000605589 952 ntBASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCLL1Q8TB92 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCLL1Q8TB92 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 LINC01126-201ENST00000623515 1646 ntBASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms