Protein–RNA interactions for Protein: Q8NE01

CNNM3, Metal transporter CNNM3, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3Q8NE01 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CNNM3Q8NE01 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.58■□□□□ 0.89
CNNM3Q8NE01 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNNM3Q8NE01 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CNNM3Q8NE01 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CNNM3Q8NE01 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CNNM3Q8NE01 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.58■□□□□ 0.88
CNNM3Q8NE01 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNNM3Q8NE01 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNNM3Q8NE01 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNNM3Q8NE01 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 LINC01126-201ENST00000623515 1646 ntBASIC20.57■□□□□ 0.88
CNNM3Q8NE01 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 AC091076.1-201ENST00000610741 619 ntBASIC20.57■□□□□ 0.88
CNNM3Q8NE01 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNNM3Q8NE01 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 AC112497.1-201ENST00000624824 639 ntBASIC20.56■□□□□ 0.88
CNNM3Q8NE01 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.56■□□□□ 0.88
CNNM3Q8NE01 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.56■□□□□ 0.88
CNNM3Q8NE01 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 AC020916.1-201ENST00000587762 1774 ntBASIC20.55■□□□□ 0.88
CNNM3Q8NE01 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 AC104390.1-201ENST00000555663 520 ntBASIC20.55■□□□□ 0.88
CNNM3Q8NE01 AC009065.1-201ENST00000564055 1225 ntBASIC20.55■□□□□ 0.88
CNNM3Q8NE01 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 AL121956.5-201ENST00000625261 221 ntBASIC20.55■□□□□ 0.88
CNNM3Q8NE01 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNNM3Q8NE01 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms