Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 AC034105.1-201ENST00000563488 319 ntBASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 AC140113.2-201ENST00000604370 208 ntBASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 Z83851.2-201ENST00000609564 659 ntBASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 AC008735.5-201ENST00000623544 497 ntBASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 UPF3AP3-201ENST00000420996 769 ntBASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 AC098831.1-202ENST00000438821 336 ntBASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 AL356488.2-201ENST00000602755 427 ntBASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 AL138781.2-201ENST00000617896 1843 ntBASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNPOQ8N3V7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SYNPOQ8N3V7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SYNPOQ8N3V7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SYNPOQ8N3V7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SYNPOQ8N3V7 AL161938.1-201ENST00000569833 2180 ntBASIC18.27■□□□□ 0.51
SYNPOQ8N3V7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYNPOQ8N3V7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 CROCCP3-202ENST00000420820 1947 ntBASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 DNAJB3-201ENST00000446806 729 ntBASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 AC092910.1-201ENST00000482027 1129 ntBASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 AC025062.2-201ENST00000605477 670 ntBASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 AL691403.2-201ENST00000618460 490 ntBASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 LINC00602-201ENST00000629776 2065 ntBASIC18.26■□□□□ 0.51
SYNPOQ8N3V7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms