Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC24.83■■□□□ 1.57
LTBP4Q8N2S1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC24.83■■□□□ 1.57
LTBP4Q8N2S1 AL391422.3-201ENST00000603791 2761 ntBASIC24.83■■□□□ 1.57
LTBP4Q8N2S1 AC073314.1-201ENST00000568729 2216 ntBASIC24.83■■□□□ 1.57
LTBP4Q8N2S1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
LTBP4Q8N2S1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LTBP4Q8N2S1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LTBP4Q8N2S1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC24.83■■□□□ 1.56
LTBP4Q8N2S1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC24.83■■□□□ 1.56
LTBP4Q8N2S1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC24.83■■□□□ 1.56
LTBP4Q8N2S1 AC069120.2-201ENST00000524091 540 ntBASIC24.83■■□□□ 1.56
LTBP4Q8N2S1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
LTBP4Q8N2S1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC24.83■■□□□ 1.56
LTBP4Q8N2S1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTBP4Q8N2S1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 TBC1D3P5-201ENST00000579401 1545 ntBASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LTBP4Q8N2S1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 KLF4P1-201ENST00000412782 1185 ntBASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 SPTLC1P1-201ENST00000447199 261 ntBASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 PPP6R2P1-201ENST00000450880 1275 ntBASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 GIMAP3P-201ENST00000495150 836 ntBASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 AL133338.1-201ENST00000565695 1517 ntBASIC24.8■■□□□ 1.56
LTBP4Q8N2S1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 SPTSSB-204ENST00000617024 1292 ntBASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 FP475955.4-201ENST00000623131 1990 ntBASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 RBPMS2P1-201ENST00000437762 623 ntBASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 TMPRSS11CP-201ENST00000453277 683 ntBASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 AL512638.1-201ENST00000457493 794 ntBASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 RN7SL589P-201ENST00000481268 310 ntBASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 AC243562.1-201ENST00000560672 389 ntBASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 AL033527.4-201ENST00000641026 673 ntBASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
LTBP4Q8N2S1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 AC002056.1-201ENST00000395613 760 ntBASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24.78■■□□□ 1.56
LTBP4Q8N2S1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms