Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 LAGE3P1-201ENST00000425356 484 ntBASIC18.42■□□□□ 0.54
SIX5Q8N196 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.42■□□□□ 0.54
SIX5Q8N196 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.42■□□□□ 0.54
SIX5Q8N196 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.42■□□□□ 0.54
SIX5Q8N196 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.42■□□□□ 0.54
SIX5Q8N196 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.42■□□□□ 0.54
SIX5Q8N196 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.42■□□□□ 0.54
SIX5Q8N196 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.42■□□□□ 0.54
SIX5Q8N196 AC064836.3-201ENST00000607928 673 ntBASIC18.42■□□□□ 0.54
SIX5Q8N196 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SIX5Q8N196 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SIX5Q8N196 MTMR9LP-203ENST00000426597 1545 ntBASIC18.42■□□□□ 0.54
SIX5Q8N196 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 AC141586.3-201ENST00000562166 1838 ntBASIC18.42■□□□□ 0.54
SIX5Q8N196 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.42■□□□□ 0.54
SIX5Q8N196 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SIX5Q8N196 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SIX5Q8N196 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.41■□□□□ 0.54
SIX5Q8N196 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.41■□□□□ 0.54
SIX5Q8N196 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SIX5Q8N196 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.41■□□□□ 0.54
SIX5Q8N196 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.41■□□□□ 0.54
SIX5Q8N196 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.41■□□□□ 0.54
SIX5Q8N196 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.41■□□□□ 0.54
SIX5Q8N196 AC005829.1-201ENST00000570002 483 ntBASIC18.41■□□□□ 0.54
SIX5Q8N196 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.41■□□□□ 0.54
SIX5Q8N196 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.41■□□□□ 0.54
SIX5Q8N196 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.41■□□□□ 0.54
SIX5Q8N196 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SIX5Q8N196 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.41■□□□□ 0.54
SIX5Q8N196 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SIX5Q8N196 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SIX5Q8N196 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SIX5Q8N196 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SIX5Q8N196 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SIX5Q8N196 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.4■□□□□ 0.54
SIX5Q8N196 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.4■□□□□ 0.54
SIX5Q8N196 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.4■□□□□ 0.54
SIX5Q8N196 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
SIX5Q8N196 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.4■□□□□ 0.54
SIX5Q8N196 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.4■□□□□ 0.54
SIX5Q8N196 MIR1199-201ENST00000621445 119 ntBASIC18.4■□□□□ 0.54
SIX5Q8N196 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.4■□□□□ 0.54
SIX5Q8N196 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 LINC00602-201ENST00000629776 2065 ntBASIC18.4■□□□□ 0.54
SIX5Q8N196 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SIX5Q8N196 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.39■□□□□ 0.54
SIX5Q8N196 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.39■□□□□ 0.54
SIX5Q8N196 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SIX5Q8N196 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SIX5Q8N196 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms