Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 NOC2LP1-202ENST00000452600 2235 ntBASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 FLJ13224-201ENST00000313737 1514 ntBASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 KRT18P65-201ENST00000439811 1286 ntBASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 DUTP2-201ENST00000519164 463 ntBASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 AC009154.2-201ENST00000621177 724 ntBASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SCUBE3Q8IX30 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 AC068472.1-201ENST00000474589 881 ntBASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 AL121672.3-201ENST00000608644 468 ntBASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SCUBE3Q8IX30 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCUBE3Q8IX30 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms