Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 HCG4P8-203ENST00000443049 980 ntBASIC11.94□□□□□ -0.5
SCXQ7RTU7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.94□□□□□ -0.5
SCXQ7RTU7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCXQ7RTU7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 AC068880.1-201ENST00000507289 2297 ntBASIC11.93□□□□□ -0.5
SCXQ7RTU7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 MCCD1P1-208ENST00000445732 328 ntBASIC11.93□□□□□ -0.5
SCXQ7RTU7 AC034232.1-201ENST00000506026 1064 ntBASIC11.93□□□□□ -0.5
SCXQ7RTU7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 GAS2L1P1-201ENST00000420145 1480 ntBASIC11.93□□□□□ -0.5
SCXQ7RTU7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SCXQ7RTU7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SCXQ7RTU7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms